Stefan Hoops: search on Z-Library

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1

[ASME ASME Turbo Expo 2015: Turbine Technical Conference and Exposition - Montreal, Quebec, Canada (Monday 15 June 2015)] Volume 9: Oil and Gas Applications; Supercritical CO2 Power Cycles; Wind Energy - Design of an Air Dynamometer for Direct Connection to the SunShot SCO 2 Turbine Expander Shaft

Hoopes, Kevin, Moore, J. Jeffrey, Cich, Stefan, Kalra, Chiranjeev

Year:

2015

Language:

english

File:

PDF, 1.31 MB

english, 2015

2

Identification of a novel AS160 splice variant that regulates GLUT4 translocation and glucose-uptake in rat muscle cells

Daniela Baus, Kathrin Heermeier, Meltsje De Hoop, Christiane Metz-Weidmann, Johann Gassenhuber, Werner Dittrich, Stefan Welte, Norbert Tennagels

Journal:

Cellular Signalling

Year:

2008

Language:

english

File:

PDF, 1.30 MB

english, 2008

3

A Cheap Lunch for Emerging Markets: Removing International Financial Market Imperfections with Modern Financial Instruments

Christian Bauer, Bernhard Herz, Stefan Hoops

Journal:

World Development

Year:

2008

Language:

english

File:

PDF, 194 KB

english, 2008

4

Apoptotic Vesicles Crossprime CD8 T Cells and Protect against Tuberculosis

Florian Winau, Stephan Weber, Subash Sad, Juana de Diego, Silvia Locatelli Hoops, Bernadette Breiden, Konrad Sandhoff, Volker Brinkmann, Stefan H.E. Kaufmann, Ulrich E. Schaible

Journal:

Year:

2006

Language:

english

File:

PDF, 596 KB

english, 2006

5

Condor-COPASI: high-throughput computing for biochemical networks

Edward Kent, Stefan Hoops, Pedro Mendes

Journal:

BMC Systems Biology

Year:

2012

Language:

english

File:

PDF, 1.35 MB

english, 2012

6

Hybrid modeling and simulation of stochastic effects on progression through the eukaryotic cell cycle

Liu, Zhen, Pu, Yang, Li, Fei, Shaffer, Clifford A., Hoops, Stefan, Tyson, John J., Cao, Yang

Journal:

The Journal of Chemical Physics

Year:

2012

Language:

english

File:

PDF, 908 KB

english, 2012

7

Multistate Model Builder (MSMB): a flexible editor for compact biochemical models

Palmisano, Alida, Hoops, Stefan, Watson, Layne T, Jones Jr, Thomas C, Tyson, John J, Shaffer, Clifford A

Journal:

BMC Systems Biology

Year:

2014

Language:

english

File:

PDF, 1.38 MB

english, 2014

8

[IEEE 2012 IEEE International Symposium on Parallel & Distributed Processing (IPDPS) - Shanghai, China (2012.05.21-2012.05.25)] 2012 IEEE 26th International Parallel and Distributed Processing Symposium - High-Performance Interaction-Based Simulation of Gut Immunopathologies with ENteric Immunity Simulator (ENISI)

Bisset, Keith, Alam, Md. Maksudul, Bassaganya-Riera, Josep, Carbo, Adria, Eubank, Stephen, Hontecillas, Raquel, Hoops, Stefan, Mei, Yongguo, Wendelsdorf, Katherine, Xie, Dawen, Yeom, Jae-Seung, Marath

Year:

2012

Language:

english

File:

PDF, 995 KB

english, 2012

9

[IEEE 2012 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Philadelphia, PA, USA (2012.10.4-2012.10.7)] 2012 IEEE International Conference on Bioinformatics and Biomedicine - ENISI Visual, an agent-based simulator for modeling gut immunity

Mei, Yongguo, Hontecillas, Raquel, Zhang, Xiaoying, Bisset, Keith, Eubank, Stephen, Hoops, Stefan, Marathe, Madhav, Bassaganya-Riera, Josep

Year:

2012

Language:

english

File:

PDF, 1.11 MB

english, 2012

10

[IEEE 2006 Winter Simulation Conference - Monterey, CA, USA (2006.12.3-2006.12.6)] Proceedings of the 2006 Winter Simulation Conference - Simulation of Biochemical Networks using Copasi - A Complex Pathway Simulator

Sahle, Sven, Gauges, Ralph, Pahle, Jurgen, Simus, Natalia, Kummer, Ursula, Hoops, Stefan, Lee, Christine, Singhal, Mudita, Xu, Liang, Mendes, Pedro

Year:

2006

Language:

english

File:

PDF, 985 KB

english, 2006

11

ENISI SDE: A New Web-Based Tool for Modeling Stochastic Processes

Mei, Yongguo, Carbo, Adria, Hoops, Stefan, Hontecillas, Raquel, Bassaganya-Riera, Josep

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2015

Language:

english

File:

PDF, 484 KB

english, 2015

12

Systems Modeling of Molecular Mechanisms Controlling Cytokine-driven CD4+ T Cell Differentiation and Phenotype Plasticity

Carbo, Adria, Hontecillas, Raquel, Kronsteiner, Barbara, Viladomiu, Monica, Pedragosa, Mireia, Lu, Pinyi, Philipson, Casandra W., Hoops, Stefan, Marathe, Madhav, Eubank, Stephen, Bisset, Keith, Wendel

Journal:

PLoS Computational Biology

Year:

2013

Language:

english

File:

PDF, 2.32 MB

english, 2013

13

Supervised learning methods in modeling of CD4+ T cell heterogeneity

Lu, Pinyi, Abedi, Vida, Mei, Yongguo, Hontecillas, Raquel, Hoops, Stefan, Carbo, Adria, Bassaganya-Riera, Josep

Journal:

Year:

2015

Language:

english

File:

PDF, 1.43 MB

english, 2015

14

[IEEE 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Washington, DC, USA (2015.11.9-2015.11.12)] 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - ENISI multiscale modeling of mucosal immune responses driven by high performance computing

Abedi, Vida, Hontecillas, Raquel, Hoops, Stefan, Liles, Nathan, Carbo, Adria, Lu, Pinyi, Philipson, Casandra, ABassaganya-Riera, Josep

Year:

2015

Language:

english

File:

PDF, 680 KB

english, 2015

15

Bistability analyses of CD4+ T follicular helper and regulatory cells during Helicobacter pylori infection

Leber, Andrew, Abedi, Vida, Hontecillas, Raquel, Viladomiu, Monica, Hoops, Stefan, Ciupe, Stanca, Caughman, John, Andrew, Tricity, Bassaganya-Riera, Josep

Journal:

Journal of Theoretical Biology

Year:

2016

Language:

english

File:

PDF, 2.79 MB

english, 2016

16

[IEEE 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Belfast, United Kingdom (2014.11.2-2014.11.5)] 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - ENISI MSM: A novel multi-scale modeling platform for computational immunology

Mei, Yongguo, Carbo, Adria, Hontecillas, Raquel, Hoops, Stefan, Liles, Nathan, Lu, Pinyi, Philipson, Casandra, Bassaganya-Riera, Josep

Year:

2014

Language:

english

File:

PDF, 494 KB

english, 2014

17

JigCell Run Manager (JC-RM): a tool for managing large sets of biochemical model parametrizations

Palmisano, Alida, Hoops, Stefan, Watson, Layne T., Jones, Thomas C., Tyson, John J., Shaffer, Clifford A.

Journal:

BMC Systems Biology

Year:

2015

Language:

english

File:

PDF, 3.63 MB

english, 2015

18

SPIE Proceedings [SPIE SPIE Medical Imaging - San Diego, California, USA (Saturday 13 February 2010)] Medical Imaging 2010: Computer-Aided Diagnosis - Reproducibility of airway wall thickness measurements

Schmidt, Michael, Karssemeijer, Nico, Summers, Ronald M., Kuhnigk, Jan-Martin, Krass, Stefan, Owsijewitsch, Michael, de Hoop, Bartjan, Peitgen, Heinz-Otto

Year:

2010

File:

PDF, 1.16 MB

2010

19

Image Subtraction Facilitates Assessment of Volume and Density Change in Ground-Glass Opacities in Chest CT

Staring, Marius, Pluim, Josien P. W., de Hoop, Bartjan, Klein, Stefan, van Ginneken, Bram, Gietema, Hester, Nossent, George, Schaefer-Prokop, Cornelia, van de Vorst, Saskia, Prokop, Mathias

Journal:

Investigative Radiology

Year:

2009

Language:

english

File:

PDF, 614 KB

english, 2009

20

COPASI and its applications in biotechnology

Bergmann, Frank T., Hoops, Stefan, Klahn, Brian, Kummer, Ursula, Mendes, Pedro, Pahle, Jürgen, Sahle, Sven

Journal:

Journal of Biotechnology

Year:

2017

Language:

english

File:

PDF, 6.74 MB

english, 2017

21

Agents and networks to model the dynamic interactions of intracellular transport

Mayorga, Luis S., Verma, Meghna, Hontecillas, Raquel, Hoops, Stefan, Bassaganya-Riera, Josep

Journal:

Cellular Logistics

Year:

2017

Language:

english

File:

PDF, 684 KB

english, 2017

22

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core

Hucka, Michael, Bergmann, Frank T., Hoops, Stefan, Keating, Sarah M., Sahle, Sven, Schaff, James C., Smith, Lucian P., Wilkinson, Darren J.

Journal:

Journal of Integrative Bioinformatics

Year:

2015

Language:

english

File:

PDF, 2.28 MB

english, 2015

23

JigCell Model Connector: building large molecular network models from components

Jones, Thomas C, Hoops, Stefan, Watson, Layne T, Palmisano, Alida, Tyson, John J, Shaffer, Clifford A

Journal:

SIMULATION: Transactions of the Society for Modeling and Simulation

Year:

2018

Language:

english

File:

PDF, 3.14 MB

english, 2018

24

Association between single-nucleotide polymorphisms and adverse events in nivolumab-treated non-small cell lung cancer patients

Bins, Sander, Basak, Edwin A., el Bouazzaoui, Samira, Koolen, Stijn L. W., Oomen – de Hoop, E., van der Leest, Cor H., van der Veldt, Astrid A. M., Sleijfer, Stefan, Debets, Reno, van Schaik, Ron H. N

Journal:

British Journal of Cancer

Year:

2018

Language:

english

File:

PDF, 363 KB

english, 2018

25

Modeling the Role of Peroxisome Proliferator-Activated Receptor γ and MicroRNA-146 in Mucosal Immune Responses to Clostridium difficile

Viladomiu, Monica, Hontecillas, Raquel, Pedragosa, Mireia, Carbo, Adria, Hoops, Stefan, Michalak, Pawel, Michalak, Katarzyna, Guerrant, Richard L., Roche, James K., Warren, Cirle A., Bassaganya-Riera,

Journal:

Year:

2012

Language:

english

File:

PDF, 781 KB

english, 2012

26

Sensitivity Analysis of an ENteric Immunity SImulator (ENISI)-Based Model of Immune Responses to Helicobacter pylori Infection

Alam, Maksudul, Deng, Xinwei, Philipson, Casandra, Bassaganya-Riera, Josep, Bisset, Keith, Carbo, Adria, Eubank, Stephen, Hontecillas, Raquel, Hoops, Stefan, Mei, Yongguo, Abedi, Vida, Marathe, Madhav

Journal:

Year:

2015

Language:

english

File:

PDF, 1.39 MB

english, 2015

27

Modeling the Regulatory Mechanisms by Which NLRX1 Modulates Innate Immune Responses to Helicobacter pylori Infection

Philipson, Casandra W., Bassaganya-Riera, Josep, Viladomiu, Monica, Kronsteiner, Barbara, Abedi, Vida, Hoops, Stefan, Michalak, Pawel, Kang, Lin, Girardin, Stephen E., Hontecillas, Raquel, Chakravortt

Journal:

Year:

2015

Language:

english

File:

PDF, 2.89 MB

english, 2015

28

Modeling the Mechanisms by Which HIV-Associated Immunosuppression Influences HPV Persistence at the Oral Mucosa

Verma, Meghna, Erwin, Samantha, Abedi, Vida, Hontecillas, Raquel, Hoops, Stefan, Leber, Andrew, Bassaganya-Riera, Josep, Ciupe, Stanca M., Poli, Guido

Journal:

Year:

2017

Language:

english

File:

PDF, 2.73 MB

english, 2017

29

Generation and characterization of epoxide hydrolase 3 (EPHX3)-deficient mice

Hoopes, Samantha L., Gruzdev, Artiom, Edin, Matthew L., Graves, Joan P., Bradbury, J. Alyce, Flake, Gordon P., Lih, Fred B., DeGraff, Laura M., Zeldin, Darryl C., Liebner, Stefan

Journal:

Year:

2017

Language:

english

File:

PDF, 6.30 MB

english, 2017

30

The Effects of Diversification Activities on the Technical Efficiency of Organic Farms in Switzerland, Austria, and Southern Germany

Lakner, Sebastian, Kirchweger, Stefan, Hoop, Daniel, Brümmer, Bernhard, Kantelhardt, Jochen

Journal:

Year:

2018

Language:

english

File:

PDF, 784 KB

english, 2018

31

Computational modeling of heterogeneity and function of CD4+ T cells

Carbo, Adria, Hontecillas, Raquel, Andrew, Tricity, Eden, Kristin, Mei, Yongguo, Hoops, Stefan, Bassaganya-Riera, Josep

Journal:

Frontiers in Cell and Developmental Biology

Year:

2014

Language:

english

File:

PDF, 1.63 MB

english, 2014

32

SBML Level 3 package: Hierarchical Model Composition, Version 1 Release 3

Smith, Lucian P., Hucka, Michael, Hoops, Stefan, Finney, Andrew, Ginkel, Martin, Myers, Chris J., Moraru, Ion, Liebermeister, Wolfram

Journal:

Journal of Integrative Bioinformatics

Year:

2015

Language:

english

File:

PDF, 1.18 MB

english, 2015

33

Computational Immunology || Immunoinformatics Cyberinfrastructure for Modeling and Analytics

Year:

2016

Language:

english

File:

PDF, 3.92 MB

english, 2016

34

Computational Immunology || Ordinary Differential Equations (ODEs) Based Modeling

Year:

2016

Language:

english

File:

PDF, 2.73 MB

english, 2016

35

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 2 Core

Hucka, Michael, Bergmann, Frank T., Dräger, Andreas, Hoops, Stefan, Keating, Sarah M., Le Novère, Nicolas, Myers, Chris J., Olivier, Brett G., Sahle, Sven, Schaff, James C., Smith, Lucian P., Waltemat

Journal:

Journal of Integrative Bioinformatics

Language:

english

File:

PDF, 2.46 MB

english

36

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core

Hucka, Michael, Bergmann, Frank T., Dräger, Andreas, Hoops, Stefan, Keating, Sarah M., Le Novère, Nicolas, Myers, Chris J., Olivier, Brett G., Sahle, Sven, Schaff, James C., Smith, Lucian P., Waltemat

Journal:

Journal of Integrative Bioinformatics

Language:

english

File:

PDF, 2.16 MB

english

37

High-throughput isolation of circulating tumor DNA:a comparison of automated platforms

van Dessel, Lisanne F., Vitale, Silvia R., Helmijr, Jean C.A., Wilting, Saskia M., van der Vlugt-Daane, Michelle, Oomen-de Hoop, Esther, Sleijfer, Stefan, Martens, John W.M., Jansen, Maurice P.H.M., L

Journal:

Molecular Oncology

Year:

2018

Language:

english

File:

PDF, 1.10 MB

english, 2018

38

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core

Smith, Lucian, Wilkinson, Darren, Hucka, Michael, Bergmann, Frank, Hoops, Stefan, Keating, Sarah, Sahle, Sven, Schaff, James

Journal:

Bioentrepreneur

Year:

2010

Language:

english

File:

PDF, 2.28 MB

english, 2010

39

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core

Smith, Lucian, Wilkinson, Darren, Hucka, Michael, Bergmann, Frank, Hoops, Stefan, Keating, Sarah, Sahle, Sven, Schaff, James

Journal:

Bioentrepreneur

Year:

2010

File:

PDF, 2.28 MB

2010

40

Systems Biology Markup Language (SBML) Level 2: Structures and Facilities for Model Definitions

Hucka, Michael, Finney, Andrew, Hoops, Stefan, Keating, Sarah, Le Novere, Nicolas

Journal:

Nature Precedings

Year:

2007

Language:

english

File:

PDF, 2.45 MB

english, 2007

41

Systems Biology Markup Language (SBML) Level 2: Structures and Facilities for Model Definitions

Hucka, Michael, Finney, Andrew, Hoops, Stefan, Keating, Sarah, Le Novere, Nicolas

Journal:

Nature Precedings

Year:

2007

Language:

english

File:

PDF, 2.45 MB

english, 2007

42

Systems Biology Markup Language (SBML) Level 2: Structures and Facilities for Model Definitions

Hucka, Michael, Hoops, Stefan, Keating, Sarah, Le Novère, Nicolas, Sahle, Sven, Wilkinson, Darren

Journal:

Bioentrepreneur

Year:

2008

Language:

english

File:

PDF, 2.27 MB

english, 2008

43

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core (Release 1 Candidate)

Hucka, Michael, Bergmann, Frank, Hoops, Stefan, Keating, Sarah, Sahle, Sven, Wilkinson, Darren

Journal:

Bioentrepreneur

Year:

2010

Language:

english

File:

PDF, 2.32 MB

english, 2010

44

Systems Biology Markup Language (SBML) Level 2: Structures and Facilities for Model Definitions

Hucka, Michael, Finney, Andrew, Hoops, Stefan, Keating, Sarah, Le Novere, Nicolas

Journal:

Nature Precedings

Year:

2007

File:

PDF, 2.45 MB

2007

45

Systems Biology Markup Language (SBML) Level 2: Structures and Facilities for Model Definitions

Hucka, Michael, Finney, Andrew, Hoops, Stefan, Keating, Sarah, Le Novere, Nicolas

Journal:

Nature Precedings

Year:

2007

File:

PDF, 2.45 MB

2007

46

Systems Biology Markup Language (SBML) Level 2: Structures and Facilities for Model Definitions

Hucka, Michael, Hoops, Stefan, Keating, Sarah, Le Novère, Nicolas, Sahle, Sven, Wilkinson, Darren

Journal:

Bioentrepreneur

Year:

2008

File:

PDF, 2.27 MB

2008

47

The Systems Biology Markup Language (SBML): Language Specification for Level 3 Version 1 Core (Release 1 Candidate)

Hucka, Michael, Bergmann, Frank, Hoops, Stefan, Keating, Sarah, Sahle, Sven, Wilkinson, Darren

Journal:

Bioentrepreneur

Year:

2010

File:

PDF, 2.32 MB

2010

48

Granzyme B is correlated with clinical outcome after PD-1 blockade in patients with stage IV non-small-cell lung cancer

Hurkmans, Daan P., Basak, Edwin A., Schepers, Nina, Oomen-De Hoop, Esther, Van der Leest, Cor H., El Bouazzaoui, Samira, Bins, Sander, Koolen, Stijn L. W., Sleijfer, Stefan, Van der Veldt, Astrid A. M

Journal:

Journal for ImmunoTherapy of Cancer

Year:

2020

File:

PDF, 1.14 MB

2020

49

Influence of green tea consumption on endoxifen steady-state concentration in breast cancer patients treated with tamoxifen

Braal, C. Louwrens, Hussaarts, Koen G. A. M., Seuren, Lieke, Oomen-de Hoop, Esther, de Bruijn, Peter, Buck, Stefan A. J., Bos, Monique E. M. M., Thijs-Visser, Martine F., Zuetenhorst, Hanneke J. M., M

Journal:

Breast Cancer Research and Treatment

Year:

2020

File:

PDF, 862 KB

2020

50

Defining the dimensions of Circulating Tumor Cells in a large series of breast, prostate, colon, and bladder cancer patients.

Mendelaar, Pauline A.J., Kraan, Jaco, Van, Mai, Zeune, Leonie L., Terstappen, Leon W.M.M., Oomenâ de Hoop, Esther, Martens, John W.M., Sleijfer, Stefan

Journal:

Molecular Oncology

Year:

2020

File:

PDF, 9.14 MB

2020